Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm10076-201ENSMUST00000073238 384 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
H2afb1Q9CQ70 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm13736-201ENSMUST00000119272 253 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm7809-201ENSMUST00000153199 742 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm24548-201ENSMUST00000158650 108 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
H2afb1Q9CQ70 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms