Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh15Q99PJ1 Gm9162-201ENSMUST00000182081 991 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm37782-201ENSMUST00000194879 678 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm2448-201ENSMUST00000207080 559 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm25562-201ENSMUST00000104608 133 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm12389-201ENSMUST00000117696 418 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm13039-201ENSMUST00000118638 794 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm9081-201ENSMUST00000182346 991 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm6423-201ENSMUST00000204315 934 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Gm9415-201ENSMUST00000200462 1321 ntBASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh15Q99PJ1 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm11996-201ENSMUST00000117538 915 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm15549-201ENSMUST00000121595 622 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm15982-201ENSMUST00000121681 554 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm27956-201ENSMUST00000175604 260 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh15Q99PJ1 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Gm43163-201ENSMUST00000196571 442 ntBASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Gm43969-201ENSMUST00000204833 535 ntBASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh15Q99PJ1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms