Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdk5rap3Q99LM2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Gm1335-201ENSMUST00000121653 386 ntBASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdk5rap3Q99LM2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm29127-201ENSMUST00000188304 517 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm18584-201ENSMUST00000203098 964 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm5904-201ENSMUST00000210286 865 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm45930-201ENSMUST00000221330 292 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk5rap3Q99LM2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.73□□□□□ -0.37
Cdk5rap3Q99LM2 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms