Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd3Q99LE3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd3Q99LE3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Paupar-201ENSMUST00000194826 3482 ntBASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd3Q99LE3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lysmd3Q99LE3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lysmd3Q99LE3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms