Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vmp1Q99KU0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm6222-202ENSMUST00000182143 629 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm18584-201ENSMUST00000203098 964 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm19309-201ENSMUST00000218295 205 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.91□□□□□ -0.5
Vmp1Q99KU0 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm12291-201ENSMUST00000121627 311 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm7809-201ENSMUST00000153199 742 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm23363-201ENSMUST00000175024 79 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm42627-201ENSMUST00000197347 224 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm43133-201ENSMUST00000197472 463 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.9□□□□□ -0.5
Vmp1Q99KU0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.9□□□□□ -0.5
Vmp1Q99KU0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms