Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm26232-201ENSMUST00000083360 166 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm22058-201ENSMUST00000083393 310 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.22□□□□□ -0.61
Lims1Q99JW4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lims1Q99JW4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm11425-201ENSMUST00000119608 498 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.21□□□□□ -0.61
Lims1Q99JW4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Gm9396-201ENSMUST00000076703 567 ntBASIC11.21□□□□□ -0.61
Lims1Q99JW4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lims1Q99JW4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lims1Q99JW4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lims1Q99JW4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms