Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm13736-201ENSMUST00000119272 253 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm11597-201ENSMUST00000121423 964 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm43133-201ENSMUST00000197472 463 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm6007-201ENSMUST00000208170 823 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 AC133598.1-201ENSMUST00000224327 660 ntBASIC12□□□□□ -0.49
Pcdha8Q91Y12 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha8Q91Y12 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm27243-201ENSMUST00000183964 521 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm38002-201ENSMUST00000193255 180 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm24136-201ENSMUST00000083374 165 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha8Q91Y12 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm10434-201ENSMUST00000101158 471 ntBASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm12957-201ENSMUST00000117835 377 ntBASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm12314-201ENSMUST00000118104 538 ntBASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm8062-201ENSMUST00000139696 444 ntBASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdha8Q91Y12 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms