Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Gm4726-201ENSMUST00000135604 736 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Gm6019-201ENSMUST00000148369 736 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Gm9132-201ENSMUST00000210182 832 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhac2Q91Y09 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm24891-201ENSMUST00000104391 136 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm22144-201ENSMUST00000157402 102 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm10731-201ENSMUST00000181171 448 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm8343-201ENSMUST00000182705 994 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhac2Q91Y09 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhac2Q91Y09 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms