Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Btrc-209ENSMUST00000224478 2194 ntBASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb3Q91XZ7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 AC154806.5-202ENSMUST00000227217 1443 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm42995-201ENSMUST00000197047 1330 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm12001-201ENSMUST00000121727 913 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb3Q91XZ7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm15824-201ENSMUST00000119516 955 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm38144-201ENSMUST00000192790 465 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5178-201ENSMUST00000219380 898 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 AC154441.1-201ENSMUST00000223653 1006 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 AC154730.1-201ENSMUST00000227874 816 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5161-201ENSMUST00000075243 853 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Pcdhb3Q91XZ7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms