Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm8566-201ENSMUST00000120174 465 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm14247-201ENSMUST00000120950 237 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Mir6546-201ENSMUST00000184460 62 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm28686-201ENSMUST00000187404 609 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm44882-201ENSMUST00000205702 802 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.06□□□□□ -0.16
Trex1Q91XB0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trex1Q91XB0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm2965-201ENSMUST00000198365 343 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm8956-201ENSMUST00000203939 825 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm6905-201ENSMUST00000205729 511 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm10288-201ENSMUST00000084614 537 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.05□□□□□ -0.16
Trex1Q91XB0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trex1Q91XB0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm9797-202ENSMUST00000218003 294 ntBASIC14.04□□□□□ -0.16
Trex1Q91XB0 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.04□□□□□ -0.16
Trex1Q91XB0 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.04□□□□□ -0.16
Trex1Q91XB0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.04□□□□□ -0.16
Trex1Q91XB0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trex1Q91XB0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms