Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp3Q91W36 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.77□□□□□ -0.36
Usp3Q91W36 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.77□□□□□ -0.36
Usp3Q91W36 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm22923-201ENSMUST00000174952 110 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.77□□□□□ -0.37
Usp3Q91W36 AC154595.1-201ENSMUST00000225533 1059 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp3Q91W36 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp3Q91W36 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.77□□□□□ -0.37
Usp3Q91W36 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp3Q91W36 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm6963-201ENSMUST00000147879 379 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm8581-201ENSMUST00000188636 890 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm28180-201ENSMUST00000189608 722 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm38280-201ENSMUST00000192610 158 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 AC153968.2-201ENSMUST00000215579 1140 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.76□□□□□ -0.37
Usp3Q91W36 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Usp3Q91W36 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp3Q91W36 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms