Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm15276-201ENSMUST00000145953 498 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm8018-201ENSMUST00000173536 789 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.17□□□□□ -0.14
Ddx41Q91VN6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gm13813-201ENSMUST00000120998 787 ntBASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Mir7070-201ENSMUST00000183657 86 ntBASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gm5363-201ENSMUST00000211927 938 ntBASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gm8712-201ENSMUST00000221090 701 ntBASIC14.16□□□□□ -0.14
Ddx41Q91VN6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ddx41Q91VN6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Gm13570-201ENSMUST00000140763 309 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Gm27046-201ENSMUST00000182160 463 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Gm3096-201ENSMUST00000185770 364 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.15□□□□□ -0.14
Ddx41Q91VN6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.15□□□□□ -0.14
Ddx41Q91VN6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms