Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm15881-201ENSMUST00000148792 942 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Rmrp-201ENSMUST00000157463 271 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm28324-201ENSMUST00000187913 264 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm9230-201ENSMUST00000188228 532 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm10076-201ENSMUST00000073238 384 ntBASIC12.19□□□□□ -0.46
Vsx1Q91V10 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vsx1Q91V10 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm25880-201ENSMUST00000104331 132 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm15573-201ENSMUST00000119487 540 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm25881-201ENSMUST00000157783 103 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm23153-201ENSMUST00000175323 313 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm9358-201ENSMUST00000183067 927 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm9132-201ENSMUST00000210182 832 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.18□□□□□ -0.46
Vsx1Q91V10 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vsx1Q91V10 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms