Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rpa1Q8VEE4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm22189-201ENSMUST00000103822 86 ntBASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rpa1Q8VEE4 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm14704-201ENSMUST00000120300 874 ntBASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rpa1Q8VEE4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms