Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm27243-201ENSMUST00000183964 521 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm38092-201ENSMUST00000195600 653 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm44855-201ENSMUST00000205725 362 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nup35Q8R4R6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm44872-201ENSMUST00000207864 420 ntBASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm5867-201ENSMUST00000063197 592 ntBASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nup35Q8R4R6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms