Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.3■□□□□ 0.36
Cd109Q8R422 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd109Q8R422 Gm44270-201ENSMUST00000203084 1234 ntBASIC17.3■□□□□ 0.36
Cd109Q8R422 AC112945.1-201ENSMUST00000226413 514 ntBASIC17.3■□□□□ 0.36
Cd109Q8R422 Gm37644-201ENSMUST00000192190 2270 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 AC169511.2-201ENSMUST00000226674 2063 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm9034-201ENSMUST00000182071 1005 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm29499-201ENSMUST00000189151 486 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm28329-201ENSMUST00000191208 689 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm29171-201ENSMUST00000191397 486 ntBASIC17.29■□□□□ 0.36
Cd109Q8R422 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cd109Q8R422 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cd109Q8R422 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm22920-201ENSMUST00000102175 109 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm15610-201ENSMUST00000120584 195 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd109Q8R422 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Mir7076-201ENSMUST00000183519 74 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm43186-201ENSMUST00000198130 824 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm2517-201ENSMUST00000215651 348 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Gm37348-201ENSMUST00000193104 1789 ntBASIC17.28■□□□□ 0.36
Cd109Q8R422 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd109Q8R422 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cd109Q8R422 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cd109Q8R422 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd109Q8R422 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.27■□□□□ 0.36
Cd109Q8R422 Gm11949-201ENSMUST00000117640 372 ntBASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm14585-201ENSMUST00000120713 634 ntBASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm23045-201ENSMUST00000175041 96 ntBASIC17.27■□□□□ 0.35
Cd109Q8R422 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm7600-201ENSMUST00000209657 785 ntBASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.27■□□□□ 0.35
Cd109Q8R422 Gm18636-201ENSMUST00000218846 1066 ntBASIC17.27■□□□□ 0.35
Cd109Q8R422 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Cd109Q8R422 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Cd109Q8R422 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC17.27■□□□□ 0.35
Cd109Q8R422 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cd109Q8R422 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cd109Q8R422 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms