Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.44□□□□□ -0.42
Slf1Q8R3P9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm5687-201ENSMUST00000118252 640 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Slf1Q8R3P9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slf1Q8R3P9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms