Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.06□□□□□ -0.16
Trim29Q8R2Q0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim29Q8R2Q0 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm13875-201ENSMUST00000120162 282 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm11793-201ENSMUST00000120433 981 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm27390-201ENSMUST00000184516 176 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm4034-201ENSMUST00000187674 480 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm37489-201ENSMUST00000191883 159 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm8227-201ENSMUST00000223306 571 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim29Q8R2Q0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim29Q8R2Q0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms