Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sf3a1Q8K4Z5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm24934-201ENSMUST00000103764 111 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm20482-202ENSMUST00000174729 825 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm3096-201ENSMUST00000185770 364 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3a1Q8K4Z5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3a1Q8K4Z5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Gm8885-201ENSMUST00000189382 598 ntBASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Gm44882-201ENSMUST00000205702 802 ntBASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3a1Q8K4Z5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Gm10312-201ENSMUST00000078515 489 ntBASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3a1Q8K4Z5 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms