Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx54Q8K4L0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm8451-201ENSMUST00000170338 447 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm43852-201ENSMUST00000202098 917 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm44506-201ENSMUST00000206278 965 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm7536-201ENSMUST00000077389 444 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm5453-201ENSMUST00000080866 447 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm5434-202ENSMUST00000222384 1451 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm5434-201ENSMUST00000071825 1451 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Gm44056-201ENSMUST00000204623 1427 ntBASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx54Q8K4L0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gm25766-201ENSMUST00000104101 131 ntBASIC16■□□□□ 0.15
Ddx54Q8K4L0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gm11660-201ENSMUST00000120955 412 ntBASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gm5340-201ENSMUST00000203733 880 ntBASIC16■□□□□ 0.15
Ddx54Q8K4L0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx54Q8K4L0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm13351-201ENSMUST00000118087 414 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm26134-201ENSMUST00000178484 110 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm18711-201ENSMUST00000199341 750 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm18514-201ENSMUST00000218980 436 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx54Q8K4L0 n-R5s185-201ENSMUST00000083953 119 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms