Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm5687-201ENSMUST00000118252 640 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm16296-201ENSMUST00000159905 325 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ebf4Q8K4J2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm13223-201ENSMUST00000118609 747 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm13453-201ENSMUST00000118708 357 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Itm2b-204ENSMUST00000228637 783 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.18□□□□□ -0.62
Ebf4Q8K4J2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.17□□□□□ -0.62
Ebf4Q8K4J2 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms