Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Prpf39Q8K2Z2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf39Q8K2Z2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm14726-201ENSMUST00000120623 896 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm31256-201ENSMUST00000194705 506 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf39Q8K2Z2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Prpf39Q8K2Z2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms