Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smc5Q8CG46 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm5904-201ENSMUST00000210286 865 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Gm5781-201ENSMUST00000219792 443 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.17■□□□□ 0.02
Smc5Q8CG46 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC15.17■□□□□ 0.02
Smc5Q8CG46 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smc5Q8CG46 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.16■□□□□ 0.02
Smc5Q8CG46 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm25927-201ENSMUST00000175058 117 ntBASIC15.16■□□□□ 0.02
Smc5Q8CG46 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.16■□□□□ 0.02
Smc5Q8CG46 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smc5Q8CG46 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smc5Q8CG46 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.15■□□□□ 0.02
Smc5Q8CG46 Gm24548-201ENSMUST00000158650 108 ntBASIC15.15■□□□□ 0.02
Smc5Q8CG46 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms