Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm39404-201ENSMUST00000216350 313 ntBASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc38Q8CDN8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.71□□□□□ -0.22
Ccdc38Q8CDN8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc38Q8CDN8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Gm35960-201ENSMUST00000202712 767 ntBASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Gm44958-201ENSMUST00000203734 736 ntBASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc38Q8CDN8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms