Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm11637-201ENSMUST00000120601 592 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm27682-201ENSMUST00000183930 110 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm5370-201ENSMUST00000187187 574 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm37424-201ENSMUST00000191727 561 ntBASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc87Q8CDL9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Gm8062-201ENSMUST00000139696 444 ntBASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Gm17208-201ENSMUST00000168388 535 ntBASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc87Q8CDL9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Snord83b-201ENSMUST00000104546 94 ntBASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm26185-201ENSMUST00000157692 266 ntBASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm9899-201ENSMUST00000065519 555 ntBASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccdc87Q8CDL9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 458.6 ms