Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm22133-201ENSMUST00000102082 109 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm29615-201ENSMUST00000185371 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28224-201ENSMUST00000186078 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm29001-201ENSMUST00000186177 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28292-201ENSMUST00000186593 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28101-201ENSMUST00000187608 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm29076-201ENSMUST00000187689 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28302-201ENSMUST00000187931 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28646-201ENSMUST00000188220 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28205-201ENSMUST00000189177 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm29032-201ENSMUST00000189797 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm28695-201ENSMUST00000190300 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm37448-201ENSMUST00000192795 697 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Alx1Q8C8B0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Map1b-203ENSMUST00000223725 2669 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm29199-201ENSMUST00000187766 775 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Alx1Q8C8B0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm23949-201ENSMUST00000104027 127 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm12036-201ENSMUST00000120008 530 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm12997-201ENSMUST00000120207 640 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm15610-201ENSMUST00000120584 195 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Alx1Q8C8B0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms