Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nup54Q8BTS4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Nup54Q8BTS4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Nup54Q8BTS4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup54Q8BTS4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup54Q8BTS4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nup54Q8BTS4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm13996-201ENSMUST00000118456 430 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nup54Q8BTS4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm15236-201ENSMUST00000117309 379 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm45186-201ENSMUST00000206874 478 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm18056-201ENSMUST00000207670 568 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm18061-201ENSMUST00000208350 562 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm18063-201ENSMUST00000208529 568 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm18052-201ENSMUST00000208750 559 ntBASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nup54Q8BTS4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms