Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab11fip4Q8BQP8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab11fip4Q8BQP8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.66□□□□□ -0.22
Rab11fip4Q8BQP8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.66□□□□□ -0.22
Rab11fip4Q8BQP8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Mir3102-201ENSMUST00000175555 104 ntBASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm2546-201ENSMUST00000182630 991 ntBASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab11fip4Q8BQP8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Rab11fip4Q8BQP8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gm14760-201ENSMUST00000121831 999 ntBASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Cog3-203ENSMUST00000227473 4197 ntBASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab11fip4Q8BQP8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Gm11597-201ENSMUST00000121423 964 ntBASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.63□□□□□ -0.23
Rab11fip4Q8BQP8 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms