Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp54Q8BL06 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm20392-201ENSMUST00000173047 701 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm25951-201ENSMUST00000175330 64 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm18561-201ENSMUST00000206027 804 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm45410-201ENSMUST00000211331 1093 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 AC118639.2-201ENSMUST00000226289 223 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm16380-201ENSMUST00000077997 478 ntBASIC17.17■□□□□ 0.34
Usp54Q8BL06 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp54Q8BL06 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 AC130823.1-201ENSMUST00000228929 1549 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm18983-201ENSMUST00000222884 2729 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm15615-201ENSMUST00000118876 198 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gm8899-201ENSMUST00000214635 1332 ntBASIC17.16■□□□□ 0.34
Usp54Q8BL06 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp54Q8BL06 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.15■□□□□ 0.34
Usp54Q8BL06 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 CT009546.1-201ENSMUST00000222573 1120 ntBASIC17.15■□□□□ 0.34
Usp54Q8BL06 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.15■□□□□ 0.34
Usp54Q8BL06 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.15■□□□□ 0.34
Usp54Q8BL06 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp54Q8BL06 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp54Q8BL06 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms