Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh20Q8BIZ0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdh20Q8BIZ0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm22121-201ENSMUST00000175148 54 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm43118-201ENSMUST00000199149 775 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm5781-201ENSMUST00000219792 443 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdh20Q8BIZ0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm6023-201ENSMUST00000118217 606 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gm26035-201ENSMUST00000083065 308 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdh20Q8BIZ0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms