Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim6Q8BGE7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gm15703-201ENSMUST00000120250 880 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gm18018-201ENSMUST00000198273 408 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gm42599-201ENSMUST00000201308 469 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim6Q8BGE7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.06□□□□□ -0.32
Trim6Q8BGE7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim6Q8BGE7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim6Q8BGE7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms