Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gm26956-201ENSMUST00000182176 986 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gm27243-201ENSMUST00000183964 521 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.2□□□□□ -0.46
Ubp1Q811S7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubp1Q811S7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm14539-201ENSMUST00000117527 174 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm30285-201ENSMUST00000214614 422 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.19□□□□□ -0.46
Ubp1Q811S7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubp1Q811S7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm12314-201ENSMUST00000118104 538 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm13570-201ENSMUST00000140763 309 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm16107-201ENSMUST00000162523 862 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm18351-201ENSMUST00000188646 883 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm18304-201ENSMUST00000189162 546 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms