Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim36Q80WG7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.9□□□□□ -0.5
Trim36Q80WG7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Mir8109-201ENSMUST00000184375 117 ntBASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.9□□□□□ -0.5
Trim36Q80WG7 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.9□□□□□ -0.5
Trim36Q80WG7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim36Q80WG7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim36Q80WG7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Gm14921-201ENSMUST00000118643 908 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 Gm25261-201ENSMUST00000157416 134 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.89□□□□□ -0.51
Trim36Q80WG7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim36Q80WG7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms