Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gm8885-201ENSMUST00000189382 598 ntBASIC12.29□□□□□ -0.44
Rpp38Q80UU2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpp38Q80UU2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rpp38Q80UU2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms