Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nphp3Q7TNH6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm14028-201ENSMUST00000117434 479 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Mir7070-201ENSMUST00000183657 86 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm24749-201ENSMUST00000157838 343 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm5616-201ENSMUST00000165252 384 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm8741-201ENSMUST00000174736 384 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm16505-201ENSMUST00000179981 232 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm44882-201ENSMUST00000205702 802 ntBASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.92□□□□□ -0.02
Nphp3Q7TNH6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm11989-201ENSMUST00000117240 672 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm7857-201ENSMUST00000117957 358 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm11362-201ENSMUST00000118838 850 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Gm17812-201ENSMUST00000204935 318 ntBASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.91□□□□□ -0.02
Nphp3Q7TNH6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms