Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm42518-201ENSMUST00000196277 938 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm5714-201ENSMUST00000197343 566 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ddx55Q6ZPL9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx55Q6ZPL9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm22711-201ENSMUST00000116890 133 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm13182-201ENSMUST00000122241 312 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm4310-201ENSMUST00000177847 889 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm4654-201ENSMUST00000183305 982 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm3793-201ENSMUST00000204973 672 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm6867-201ENSMUST00000219165 425 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx55Q6ZPL9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm25880-201ENSMUST00000104331 132 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm29499-201ENSMUST00000189151 486 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm28329-201ENSMUST00000191208 689 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm29171-201ENSMUST00000191397 486 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx55Q6ZPL9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms