Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm9083-201ENSMUST00000120423 819 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm10012-201ENSMUST00000078252 192 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gm13315-201ENSMUST00000120376 991 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gm19891-201ENSMUST00000189771 303 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.11□□□□□ -0.47
Scaf4Q6PFF0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Gm13492-201ENSMUST00000119772 665 ntBASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.1□□□□□ -0.47
Scaf4Q6PFF0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms