Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm3890-201ENSMUST00000182416 207 ntBASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm5781-201ENSMUST00000219792 443 ntBASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rad54bQ6PFE3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gm43818-201ENSMUST00000200605 466 ntBASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rad54bQ6PFE3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm7809-201ENSMUST00000153199 742 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm24548-201ENSMUST00000158650 108 ntBASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.37□□□□□ -0.43
Rad54bQ6PFE3 Gm5186-201ENSMUST00000218781 920 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms