Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Casc4Q6P2L7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm21769-201ENSMUST00000211922 111 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Matn2-203ENSMUST00000226766 3252 ntBASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.49□□□□□ -0.41
Casc4Q6P2L7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm25043-201ENSMUST00000158604 212 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm26956-201ENSMUST00000182176 986 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm45865-201ENSMUST00000211815 945 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Casc4Q6P2L7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm27243-201ENSMUST00000183964 521 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Gm30285-201ENSMUST00000214614 422 ntBASIC12.47□□□□□ -0.41
Casc4Q6P2L7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms