Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.12□□□□□ -0.47
VclQ64727 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.12□□□□□ -0.47
VclQ64727 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
VclQ64727 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gm14109-201ENSMUST00000118814 309 ntBASIC12.12□□□□□ -0.47
VclQ64727 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.12□□□□□ -0.47
VclQ64727 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.12□□□□□ -0.47
VclQ64727 Gm6082-201ENSMUST00000215204 454 ntBASIC12.12□□□□□ -0.47
VclQ64727 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Gm9257-201ENSMUST00000221254 232 ntBASIC12.12□□□□□ -0.47
VclQ64727 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.12□□□□□ -0.47
VclQ64727 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.12□□□□□ -0.47
VclQ64727 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.12□□□□□ -0.47
VclQ64727 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.12□□□□□ -0.47
VclQ64727 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VclQ64727 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.11□□□□□ -0.47
VclQ64727 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VclQ64727 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
VclQ64727 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VclQ64727 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VclQ64727 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.11□□□□□ -0.47
VclQ64727 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.11□□□□□ -0.47
VclQ64727 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm14832-201ENSMUST00000121289 322 ntBASIC12.11□□□□□ -0.47
VclQ64727 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.11□□□□□ -0.47
VclQ64727 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VclQ64727 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.11□□□□□ -0.47
VclQ64727 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VclQ64727 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VclQ64727 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VclQ64727 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms