Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Gm43249-201ENSMUST00000200464 458 ntBASIC11.34□□□□□ -0.59
AtmQ62388 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Gm38151-201ENSMUST00000195085 289 ntBASIC11.34□□□□□ -0.59
AtmQ62388 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
AtmQ62388 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
AtmQ62388 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
AtmQ62388 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Gm4310-201ENSMUST00000177847 889 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Gm5714-201ENSMUST00000197343 566 ntBASIC11.33□□□□□ -0.6
AtmQ62388 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
AtmQ62388 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.33□□□□□ -0.6
AtmQ62388 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
AtmQ62388 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.33□□□□□ -0.6
AtmQ62388 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Gm14892-201ENSMUST00000117636 267 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Mir6953-201ENSMUST00000184745 68 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
AtmQ62388 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Gm30671-201ENSMUST00000214898 318 ntBASIC11.33□□□□□ -0.6
AtmQ62388 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.33□□□□□ -0.6
AtmQ62388 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AtmQ62388 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtmQ62388 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.32□□□□□ -0.6
AtmQ62388 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Map1b-203ENSMUST00000223725 2669 ntBASIC11.32□□□□□ -0.6
AtmQ62388 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
AtmQ62388 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtmQ62388 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms