Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.35□□□□□ -0.75
SspnQ62147 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SspnQ62147 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
SspnQ62147 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm11424-201ENSMUST00000121929 829 ntBASIC10.34□□□□□ -0.75
SspnQ62147 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SspnQ62147 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.34□□□□□ -0.75
SspnQ62147 Gm7029-201ENSMUST00000173226 450 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.34□□□□□ -0.75
SspnQ62147 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.34□□□□□ -0.75
SspnQ62147 Gm32025-201ENSMUST00000217960 307 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SspnQ62147 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.34□□□□□ -0.75
SspnQ62147 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.34□□□□□ -0.75
SspnQ62147 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SspnQ62147 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.33□□□□□ -0.76
SspnQ62147 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.33□□□□□ -0.76
SspnQ62147 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.33□□□□□ -0.76
SspnQ62147 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.33□□□□□ -0.76
SspnQ62147 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.33□□□□□ -0.76
SspnQ62147 Gm9630-201ENSMUST00000178304 885 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.33□□□□□ -0.76
SspnQ62147 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Gm24526-201ENSMUST00000082921 158 ntBASIC10.33□□□□□ -0.76
SspnQ62147 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SspnQ62147 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.33□□□□□ -0.76
SspnQ62147 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.33□□□□□ -0.76
SspnQ62147 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SspnQ62147 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SspnQ62147 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms