Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm4271-201ENSMUST00000174444 973 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm27331-201ENSMUST00000183705 60 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm37497-201ENSMUST00000195830 798 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm45177-201ENSMUST00000209104 2307 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm45259-201ENSMUST00000209217 1006 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm6013-201ENSMUST00000212264 699 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Foxc1Q61572 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.35□□□□□ -0.91
Foxc1Q61572 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.35□□□□□ -0.91
Foxc1Q61572 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Foxc1Q61572 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm20121-201ENSMUST00000198547 1594 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
Foxc1Q61572 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm12978-201ENSMUST00000121250 522 ntBASIC9.34□□□□□ -0.91
Foxc1Q61572 Gm14905-201ENSMUST00000122351 639 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms