Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc88aQ5SNZ0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm11801-201ENSMUST00000117807 746 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm25545-201ENSMUST00000122673 323 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm22144-201ENSMUST00000157402 102 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm4034-201ENSMUST00000187674 480 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc88aQ5SNZ0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm13809-201ENSMUST00000117921 597 ntBASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm13600-201ENSMUST00000117949 744 ntBASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Mir7076-201ENSMUST00000183519 74 ntBASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc88aQ5SNZ0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc88aQ5SNZ0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm25072-201ENSMUST00000175233 235 ntBASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Gm25951-201ENSMUST00000175330 64 ntBASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc88aQ5SNZ0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms