Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm23935-201ENSMUST00000102303 57 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm24270-201ENSMUST00000102326 57 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm24245-201ENSMUST00000157318 57 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm42612-201ENSMUST00000197986 623 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm43170-201ENSMUST00000199827 612 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Syt7-204ENSMUST00000223586 1344 ntBASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm11637-201ENSMUST00000120601 592 ntBASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mir7654-201ENSMUST00000185082 70 ntBASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms