Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav3-3Q5R1C3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm14822-201ENSMUST00000122247 291 ntBASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav3-3Q5R1C3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms