Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Spire1Q52KF3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm13461-201ENSMUST00000120980 662 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm37246-201ENSMUST00000192665 835 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm5051-201ENSMUST00000204085 485 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.54□□□□□ -0.4
Spire1Q52KF3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.54□□□□□ -0.4
Spire1Q52KF3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Ginm1-202ENSMUST00000065124 300 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Spire1Q52KF3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.52□□□□□ -0.4
Spire1Q52KF3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms