Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Gm45500-201ENSMUST00000211676 803 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Gm9797-202ENSMUST00000218003 294 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fam196aQ3USH1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm14274-201ENSMUST00000117182 615 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm9022-201ENSMUST00000182482 992 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.37□□□□□ -0.43
Fam196aQ3USH1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm7722-201ENSMUST00000120646 741 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm11836-201ENSMUST00000121022 441 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm29499-201ENSMUST00000189151 486 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm28329-201ENSMUST00000191208 689 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm29171-201ENSMUST00000191397 486 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fam196aQ3USH1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms