Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upf3aQ3ULJ3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm15881-201ENSMUST00000148792 942 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upf3aQ3ULJ3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upf3aQ3ULJ3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms