Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm42599-201ENSMUST00000201308 469 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Brf2Q3UAW9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Brf2Q3UAW9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Brf2Q3UAW9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Brf2Q3UAW9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Brf2Q3UAW9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Brf2Q3UAW9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm12058-201ENSMUST00000118614 437 ntBASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.58□□□□□ -0.56
Brf2Q3UAW9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Brf2Q3UAW9 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gm22018-201ENSMUST00000104357 131 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gm43133-201ENSMUST00000197472 463 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gm18062-201ENSMUST00000208020 547 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Gm18055-201ENSMUST00000208254 547 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Brf2Q3UAW9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms